crygm2d1 crystallin, gamma M2d1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: crygm2d1provided by ZNC
Official Full Name: crystallin, gamma M2d1provided by ZNC
Primary source: ZFIN:ZDB-GENE-050522-395
See related: Ensembl:ENSDARG00000087324 AllianceGenome:ZFIN:ZDB-GENE-050522-395
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: crygEM2-1; zgc:109890; zgc:112327; zgc:173493
Summary: Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in lens and solid lens vesicle. Orthologous to human CRYGA (crystallin gamma A). [provided by Alliance of Genome Resources, Oct 2024]
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Genomic context

Location:: chromosome: 9

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	9	NC_007120.7 (22338654..22339472, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	9	NC_007120.6 (22527785..22528603, complement)

Chromosome 9 - NC_007120.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables structural constituent of eye lens	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in lens development in camera-type eye	IBA Inferred from Biological aspect of Ancestor more info
involved_in visual perception	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: crystallin, gamma M2d1

Names: Gamma crystallin M2; crystallin gamma EM2-1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001020681.2 → NP_001018517.2 crystallin, gamma M2d1

Status: PROVISIONAL

Source sequence(s)

BC095033

UniProtKB/TrEMBL

A0A8M1N6C0, B0S6M3, Q504G5

Related

ENSDARP00000113292.1, ENSDART00000134805.2

Conserved Domains (2) summary

smart00247
Location:4 → 83

XTALbg; Beta/gamma crystallins

pfam00030
Location:91 → 170

Crystall; Beta/Gamma crystallin