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sstr1b somatostatin receptor 1b [ Danio rerio (zebrafish) ]

Gene ID: 557645, updated on 2-Nov-2024

Summary

Official Symbol
sstr1bprovided by ZNC
Official Full Name
somatostatin receptor 1bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-120410-2
See related
Ensembl:ENSDARG00000067925 AllianceGenome:ZFIN:ZDB-GENE-120410-2
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable somatostatin receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Orthologous to human SSTR4 (somatostatin receptor 4). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See sstr1b in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (18412622..18445702, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (18162689..18193789, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene Ras converting CAAX endopeptidase 1a Neighboring gene CD248 molecule, endosialin a Neighboring gene zinc finger protein 16 like Neighboring gene regulator of G protein signaling 12a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables somatostatin receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
somatostatin receptor type 1
Names
somatostatin receptor type 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    18412622..18445702 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005172218.5XP_005172275.1  somatostatin receptor type 1

    UniProtKB/TrEMBL
    A0A1D5NSQ4, A0A455LLX9
    Related
    ENSDARP00000142871.1, ENSDART00000173746.2
    Conserved Domains (2) summary
    pfam00001
    Location:55301
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:47198
    7tm_4; Olfactory receptor