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tmem131 transmembrane protein 131 [ Danio rerio (zebrafish) ]

Gene ID: 557719, updated on 12-Sep-2024

Summary

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Official Symbol
tmem131provided by ZNC
Official Full Name
transmembrane protein 131provided by ZNC
Primary source
ZFIN:ZDB-GENE-130530-662
See related
Ensembl:ENSDARG00000056259 AllianceGenome:ZFIN:ZDB-GENE-130530-662
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to be integral component of membrane. Predicted to be active in membrane. Orthologous to human TMEM131 (transmembrane protein 131). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
human mouse all
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Genomic context

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See tmem131 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
41
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (29313220..29377035, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (29322659..29386486, complement)

Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene si:ch211-201h21.5 Neighboring gene basic, immunoglobulin-like variable motif containing Neighboring gene actin-like 6A Neighboring gene mitochondrial ribosomal protein L47

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Component Evidence Code Pubs
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
transmembrane protein 131
Names
zmp:0000000659

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007117.7 Reference GRCz11 Primary Assembly

    Range
    29313220..29377035 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021477147.2 → XP_021332822.1  transmembrane protein 131 isoform X2

    UniProtKB/TrEMBL
    A0A8M9PMV5, E7F8H2
    Related
    ENSDARP00000073126.3, ENSDART00000078665.6
    Conserved Domains (1) summary
    pfam12371
    Location:87 → 168
    TMEM131_like; Transmembrane protein 131-like

  2. XM_021477146.2 → XP_021332821.1  transmembrane protein 131 isoform X1

    UniProtKB/TrEMBL
    A0A8M9QB17
    Conserved Domains (1) summary
    pfam12371
    Location:87 → 168
    TMEM131_like; Transmembrane protein 131-like

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394647.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    33299..97114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001923305.7 → XP_001923340.1  transmembrane protein 131 isoform X2

    UniProtKB/TrEMBL
    A0A8M9PMV5, E7F8H2
    Conserved Domains (1) summary
    pfam12371
    Location:87 → 168
    TMEM131_like; Transmembrane protein 131-like

  2. XM_005165961.5 → XP_005166018.1  transmembrane protein 131 isoform X1

    UniProtKB/TrEMBL
    A0A8M9QB17
    Conserved Domains (1) summary
    pfam12371
    Location:87 → 168
    TMEM131_like; Transmembrane protein 131-like
Nucleotide Protein Strain
Heading Accession and Version

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