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haus6 HAUS augmin-like complex, subunit 6 [ Danio rerio (zebrafish) ]

Gene ID: 558814, updated on 12-Sep-2024

Summary

Official Symbol
haus6provided by ZNC
Official Full Name
HAUS augmin-like complex, subunit 6provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-5517
See related
Ensembl:ENSDARG00000101652 AllianceGenome:ZFIN:ZDB-GENE-030131-5517
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fam29a; wu:fd21a02; zgc:153242
Summary
Predicted to enable microtubule binding activity. Predicted to be involved in centrosome cycle and spindle assembly. Predicted to act upstream of or within cell division. Predicted to be located in cytoplasm; microtubule; and microtubule organizing center. Predicted to be part of HAUS complex. Predicted to be active in mitotic spindle microtubule. Orthologous to human HAUS6 (HAUS augmin like complex subunit 6). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See haus6 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (59156413..59165634, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (58853983..58863204, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110439910 Neighboring gene DENN/MADD domain containing 4C Neighboring gene small Cajal body-specific RNA 8 Neighboring gene oligosaccharyltransferase complex subunit Neighboring gene uncharacterized LOC137496228

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables microtubule binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within cell division IEA
Inferred from Electronic Annotation
more info
 
involved_in centrosome cycle ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in microtubule cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within spindle assembly IEA
Inferred from Electronic Annotation
more info
 
involved_in spindle assembly ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of HAUS complex IEA
Inferred from Electronic Annotation
more info
 
part_of HAUS complex ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 
is_active_in mitotic spindle microtubule IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitotic spindle microtubule ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
HAUS augmin-like complex subunit 6
Names
family with sequence similarity 29, member A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079974.1NP_001073443.1  HAUS augmin-like complex subunit 6

    See identical proteins and their annotated locations for NP_001073443.1

    Status: PROVISIONAL

    Source sequence(s)
    BC125861
    UniProtKB/Swiss-Prot
    A0JMF7
    Related
    ENSDARP00000138489.1, ENSDART00000170853.2
    Conserved Domains (1) summary
    pfam14661
    Location:13235
    HAUS6_N; HAUS augmin-like complex subunit 6 N-terminus

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    59156413..59165634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)