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LOC560917 serine protease HTRA2, mitochondrial [ Danio rerio (zebrafish) ]

Gene ID: 560917, updated on 14-Sep-2024

Summary

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Gene symbol
LOC560917
Gene description
serine protease HTRA2, mitochondrial
See related
Ensembl:ENSDARG00000068819
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

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See LOC560917 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (34154991..34171426)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (34211131..34227135)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene serine protease HTRA2, mitochondrial-like Neighboring gene uncharacterized LOC137496598 Neighboring gene Pim proto-oncogene, serine/threonine kinase, related 147 Neighboring gene serine protease HTRA2, mitochondrial-like Neighboring gene Pim proto-oncogene, serine/threonine kinase, related 145 Neighboring gene Pim proto-oncogene, serine/threonine kinase, related 148

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
LOW QUALITY PROTEIN: serine protease HTRA2, mitochondrial; serine protease HTRA2, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    34154991..34171426
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068223849.1 → XP_068079950.1  serine protease HTRA2, mitochondrial isoform X1

    Related
    ENSDART00000109840.4

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394793.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    488044..545211
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068218605.1 → XP_068074706.1  LOW QUALITY PROTEIN: serine protease HTRA2, mitochondrial isoform X2

Nucleotide Protein
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