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si:dkey-65b13.8 si:dkey-65b13.8 [ Danio rerio (zebrafish) ]

Gene ID: 561480, updated on 12-Sep-2024

Summary

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Official Symbol
si:dkey-65b13.8provided by ZNC
Official Full Name
si:dkey-65b13.8provided by ZNC
Primary source
ZFIN:ZDB-GENE-041014-336
See related
Ensembl:ENSDARG00000115066 AllianceGenome:ZFIN:ZDB-GENE-041014-336
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

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See si:dkey-65b13.8 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (33560419..33561879)
105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (33657202..33659813)

Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel, subfamily F, member 1a Neighboring gene rho-associated protein kinase 2-like Neighboring gene rho-associated protein kinase 2-like Neighboring gene golgin subfamily A member 6-like protein 24 Neighboring gene golgin subfamily A member 6-like protein 26 Neighboring gene rho-associated, coiled-coil containing protein kinase 2b Neighboring gene golgin subfamily A member 6-like protein 24

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
uncharacterized protein LOC561480

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001044962.1 → NP_001038427.1  uncharacterized protein LOC561480

    Status: PREDICTED

    Source sequence(s)
    AL929220
    UniProtKB/TrEMBL
    A0A0R4IMH6, A0A8M1N9W0
    Related
    ENSDARP00000137473.1, ENSDART00000161563.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007131.7 Reference GRCz11 Primary Assembly

    Range
    33560419..33561879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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