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zgc:173856 zgc:173856 [ Danio rerio (zebrafish) ]

Gene ID: 561590, updated on 6-Jun-2024

Summary

Official Symbol
zgc:173856provided by ZNC
Official Full Name
zgc:173856provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-5358
See related
Ensembl:ENSDARG00000045424 AllianceGenome:ZFIN:ZDB-GENE-030131-5358
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fd14f05; fd20f07; wu:fd14f05; wu:fd20f07; wu:fy58a05
Orthologs
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Genomic context

See zgc:173856 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 24 NC_007135.7 (10018653..10021341, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 24 NC_007135.6 (9878267..9880955, complement)

Chromosome 24 - NC_007135.7Genomic Context describing neighboring genes Neighboring gene si:ch211-146l10.7 Neighboring gene zgc:171750 Neighboring gene zgc:171474 Neighboring gene si:ch211-146l10.8 Neighboring gene uncharacterized LOC100538156

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC561590

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109709.4NP_001103179.4  uncharacterized protein LOC561590 precursor

    Status: VALIDATED

    Source sequence(s)
    BX571823
    UniProtKB/TrEMBL
    A0A8M1NED9
    Related
    ENSDARP00000116912.1, ENSDART00000137250.2

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007135.7 Reference GRCz11 Primary Assembly

    Range
    10018653..10021341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)