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fbxo46 F-box protein 46 [ Danio rerio (zebrafish) ]

Gene ID: 562515, updated on 12-Sep-2024

Summary

Official Symbol
fbxo46provided by ZNC
Official Full Name
F-box protein 46provided by ZNC
Primary source
ZFIN:ZDB-GENE-060503-897
See related
Ensembl:ENSDARG00000099814 AllianceGenome:ZFIN:ZDB-GENE-060503-897
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-114g7.4
Summary
Predicted to enable metal ion binding activity. Predicted to act upstream of or within intracellular signal transduction. Orthologous to human FBXO46 (F-box protein 46). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See fbxo46 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (14592624..14600296)
105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (14656667..14664339)

Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene NUMB like endocytic adaptor protein Neighboring gene coenzyme Q8B Neighboring gene uncharacterized LOC137487728 Neighboring gene solute carrier family 5 member 2 Neighboring gene si:dkey-260j18.2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001082831.1NP_001076300.1  F-box only protein 46

    Status: PROVISIONAL

    Source sequence(s)
    CR318657, CR749778
    UniProtKB/TrEMBL
    A0A8M1NBU8, Q1L8N6
    Related
    ENSDARP00000138208.1, ENSDART00000162350.2
    Conserved Domains (1) summary
    pfam00646
    Location:536572
    F-box; F-box domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007126.7 Reference GRCz11 Primary Assembly

    Range
    14592624..14600296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394938.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    186112..186504
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)