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qdprb.4 quinoid dihydropteridine reductase b, tandem duplicate 4 [ Danio rerio (zebrafish) ]

Gene ID: 563255, updated on 17-Aug-2024

Summary

Official Symbol
qdprb.4provided by ZNC
Official Full Name
quinoid dihydropteridine reductase b, tandem duplicate 4provided by ZNC
Primary source
ZFIN:ZDB-GENE-080219-12
See related
Ensembl:ENSDARG00000090822 AllianceGenome:ZFIN:ZDB-GENE-080219-12
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:171517
Summary
Predicted to enable 6,7-dihydropteridine reductase activity; NADH binding activity; and NADPH binding activity. Predicted to be involved in L-phenylalanine catabolic process and tetrahydrobiopterin biosynthetic process. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 1 NC_007112.7 (24376394..24380533)
105 previous assembly GRCz10 (GCF_000002035.5) 1 NC_007112.6 (23685565..23689704)

Chromosome 1 - NC_007112.7Genomic Context describing neighboring genes Neighboring gene LPS-responsive vesicle trafficking, beach and anchor containing Neighboring gene uncharacterized LOC103908771 Neighboring gene ribosomal protein S3A Neighboring gene quinoid dihydropteridine reductase b, tandem duplicate 2 Neighboring gene quinoid dihydropteridine reductase b, tandem duplicate 2

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables 6,7-dihydropteridine reductase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables NADH binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables NADPH binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in L-phenylalanine catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in tetrahydrobiopterin biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
uncharacterized protein LOC563255

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001111173.1NP_001104643.1  uncharacterized protein LOC563255 precursor

    See identical proteins and their annotated locations for NP_001104643.1

    Status: PREDICTED

    Source sequence(s)
    BC153949
    UniProtKB/TrEMBL
    A8KB38
    Related
    ENSDARP00000093318.3, ENSDART00000102542.4
    Conserved Domains (1) summary
    cd05334
    Location:23244
    DHPR_SDR_c_like; dihydropteridine reductase (DHPR), classical (c) SDRs

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007112.7 Reference GRCz11 Primary Assembly

    Range
    24376394..24380533
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394482.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    249763..253902
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395216.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    112750..116908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)