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hbae4 hemoglobin alpha embryonic-4 [ Danio rerio (zebrafish) ]

Gene ID: 563335, updated on 2-Nov-2024

Summary

Official Symbol
hbae4provided by ZNC
Official Full Name
hemoglobin alpha embryonic-4provided by ZNC
Primary source
ZFIN:ZDB-GENE-980526-286
See related
Ensembl:ENSDARG00000045144 AllianceGenome:ZFIN:ZDB-GENE-980526-286
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
hbz; zgc:163057
Summary
Predicted to enable several functions, including heme binding activity; oxygen binding activity; and oxygen carrier activity. Predicted to act upstream of or within oxygen transport. Predicted to be part of hemoglobin complex. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See hbae4 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (20336087..20337274)
105 previous assembly GRCz10 (GCF_000002035.5) 12 NC_007123.6 (20214213..20215400)

Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene forkhead box J1b Neighboring gene rhomboid 5 homolog 1b (Drosophila) Neighboring gene uncharacterized LOC101884456 Neighboring gene hemoglobin beta embryonic-3

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables oxygen binding IEA
Inferred from Electronic Annotation
more info
 
enables oxygen carrier activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within oxygen transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of hemoglobin complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
Hemoglobin subunit alpha-D-like
Names
hbax
hemoglobin subunit zeta

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001082834.1NP_001076303.1  Hemoglobin subunit alpha-D-like

    See identical proteins and their annotated locations for NP_001076303.1

    Status: PROVISIONAL

    Source sequence(s)
    BC134210
    UniProtKB/TrEMBL
    A0A8M1ND80, A3KP86
    Related
    ENSDARP00000066384.4, ENSDART00000066385.5
    Conserved Domains (1) summary
    cd08927
    Location:2141
    Hb-alpha_like; Hemoglobin alpha, zeta, mu, theta, and related Hb subunits

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007123.7 Reference GRCz11 Primary Assembly

    Range
    20336087..20337274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394837.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    143571..144760
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)