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si:ch211-126c2.4 si:ch211-126c2.4 [ Danio rerio (zebrafish) ]

Gene ID: 563788, updated on 17-Aug-2024

Summary

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Official Symbol
si:ch211-126c2.4provided by ZNC
Official Full Name
si:ch211-126c2.4provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-3087
See related
Ensembl:ENSDARG00000105479 AllianceGenome:ZFIN:ZDB-GENE-030131-3087
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fc26g07; wu:fc26g07
Orthologs
all
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Genomic context

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Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (30898881..30905488, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (30558568..30578382, complement)

Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene ubiquitin-like 3b Neighboring gene solute carrier family 7 member 3b Neighboring gene forkhead box O4 Neighboring gene sestrin 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
uncharacterized protein si:ch211-126c2.4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007125.7 Reference GRCz11 Primary Assembly

    Range
    30898881..30905488 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021481192.1 → XP_021336867.1  uncharacterized protein si:ch211-126c2.4 isoform X2

    UniProtKB/TrEMBL
    A0A2R8RM09, A0A8M9PZR5
    Conserved Domains (1) summary
    cl26464
    Location:706 → 864
    Atrophin-1; Atrophin-1 family

  2. XM_021481191.1 → XP_021336866.1  uncharacterized protein si:ch211-126c2.4 isoform X1

    UniProtKB/TrEMBL
    A0A140LFS1, A0A8M9QL01
    Conserved Domains (1) summary
    cl26464
    Location:680 → 850
    Atrophin-1; Atrophin-1 family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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