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nrbp2a nuclear receptor binding protein 2a [ Danio rerio (zebrafish) ]

Gene ID: 564177, updated on 18-Sep-2024

Summary

Official Symbol
nrbp2aprovided by ZNC
Official Full Name
nuclear receptor binding protein 2aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-070713-4
See related
Ensembl:ENSDARG00000032951 AllianceGenome:ZFIN:ZDB-GENE-070713-4
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
nrbp2
Summary
Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport; intracellular signal transduction; and protein phosphorylation. Predicted to be active in cytoplasm and endomembrane system. Orthologous to human NRBP2 (nuclear receptor binding protein 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See nrbp2a in Genome Data Viewer
Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (32673366..32738549, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (32690271..32755391, complement)

Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene chemokine (C-C motif) receptor 9a Neighboring gene small nucleolar RNA SNORA57 Neighboring gene small nucleolar RNA SNORA57 Neighboring gene poly-U binding splicing factor a Neighboring gene uncharacterized LOC101887149 Neighboring gene kelch-like family member 18 Neighboring gene beaded filament structural protein 2, phakinin

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
involved_in intracellular signal transduction IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in neuron differentiation IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
nuclear receptor-binding protein 2
Names
nuclear receptor binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007113.7 Reference GRCz11 Primary Assembly

    Range
    32673366..32738549 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021467601.2XP_021323276.1  nuclear receptor-binding protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A8M9PLZ2
    Conserved Domains (1) summary
    cl21453
    Location:43301
    PKc_like; Protein Kinases, catalytic domain
  2. XM_001920637.7XP_001920672.2  nuclear receptor-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8M1QKH0
    Related
    ENSDARP00000113223.1, ENSDART00000135293.2
    Conserved Domains (2) summary
    smart00220
    Location:53300
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:43304
    PKc_like; Protein Kinases, catalytic domain