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nck1a NCK adaptor protein 1a [ Danio rerio (zebrafish) ]

Gene ID: 564584, updated on 11-Apr-2024

Summary

Official Symbol
nck1aprovided by ZNC
Official Full Name
NCK adaptor protein 1aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-070912-547
See related
Ensembl:ENSDARG00000074262 AllianceGenome:ZFIN:ZDB-GENE-070912-547
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-4m11.4
Summary
Predicted to enable ephrin receptor binding activity; receptor tyrosine kinase binding activity; and signaling adaptor activity. Predicted to be involved in several processes, including cell migration; regulation of response to endoplasmic reticulum stress; and regulation of translation. Is expressed in female organism. Orthologous to human NCK1 (NCK adaptor protein 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See nck1a in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (24963861..24981404, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (25308227..25325770, complement)

Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene angiotensin II receptor, type 1a Neighboring gene glycogenin 1a Neighboring gene helicase-like transcription factor Neighboring gene solute carrier family 35 member G2a Neighboring gene STAG1 cohesin complex component a Neighboring gene propionyl-CoA carboxylase subunit beta

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ephrin receptor binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables receptor tyrosine kinase binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables signaling adaptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007113.7 Reference GRCz11 Primary Assembly

    Range
    24963861..24981404 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_687914.6XP_693006.3  cytoplasmic protein NCK1

    UniProtKB/TrEMBL
    A0A8N7TBD0
    Related
    ENSDARP00000102138.3, ENSDART00000111212.4
    Conserved Domains (3) summary
    cd11901
    Location:4296
    SH3_Nck1_2; Second Src Homology 3 domain of Nck1 adaptor protein
    cl15255
    Location:213309
    SH2; Src homology 2 (SH2) domain
    cl17036
    Location:126182
    SH3; Src Homology 3 domain superfamily