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si:dkey-164f24.2 si:dkey-164f24.2 [ Danio rerio (zebrafish) ]

Gene ID: 566607, updated on 17-Sep-2024

Summary

Official Symbol
si:dkey-164f24.2provided by ZNC
Official Full Name
si:dkey-164f24.2provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-7035
See related
Ensembl:ENSDARG00000089418 AllianceGenome:ZFIN:ZDB-GENE-030131-7035
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fk66f10; wu:fk66f10
Orthologs
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Genomic context

See si:dkey-164f24.2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (32482744..32497823, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (32473512..32488609, complement)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor F5-like Neighboring gene epithelial mitogen homolog (mouse) Neighboring gene uncharacterized LOC137496365 Neighboring gene Rieske domain-containing protein Neighboring gene neuronal calcium sensor 1b Neighboring gene uncharacterized LOC101882414

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC566607

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001386315.1NP_001373244.1  uncharacterized protein LOC566607

    Status: VALIDATED

    Source sequence(s)
    BC154804, BX545917, BX548021, DN857445
    UniProtKB/TrEMBL
    A0A286Y8V3, A0A8M2BEM4
    Related
    ENSDARP00000143587.1, ENSDART00000176298.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    32482744..32497823 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005167194.5XP_005167251.1  uncharacterized protein LOC566607 isoform X1

    UniProtKB/TrEMBL
    A0A8M2BEI7, E7F7M1
    Related
    ENSDARP00000110777.1, ENSDART00000122359.3
    Conserved Domains (1) summary
    PRK10811
    Location:134303
    rne; ribonuclease E; Reviewed