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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007125.7 Reference GRCz11 Primary Assembly
- Range
-
34634140..34771923 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_021481045.1 → XP_021336720.1 actin-binding LIM protein 3 isoform X6
- UniProtKB/TrEMBL
-
A0A8M9QP71
- Conserved Domains (6) summary
-
- smart00153
Location:553 → 588
- VHP; Villin headpiece domain
- cd09327
Location:24 → 75
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:80 → 135
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:153 → 204
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:212 → 267
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:299 → 552
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
XM_005173323.4 → XP_005173380.1 actin-binding LIM protein 3 isoform X4
- UniProtKB/TrEMBL
- A0A8M2BKN0, H0WEN9
- Related
- ENSDARP00000125317.3, ENSDART00000150413.3
- Conserved Domains (6) summary
-
- smart00153
Location:597 → 632
- VHP; Villin headpiece domain
- cd09327
Location:24 → 75
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:80 → 135
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:153 → 204
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:212 → 267
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:302 → 596
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
XM_021481044.1 → XP_021336719.1 actin-binding LIM protein 3 isoform X3
- UniProtKB/TrEMBL
-
A0A8M9QGG2
- Conserved Domains (6) summary
-
- smart00153
Location:603 → 638
- VHP; Villin headpiece domain
- cd09327
Location:24 → 75
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:80 → 135
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:153 → 204
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:212 → 267
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:276 → 602
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
XM_005173321.4 → XP_005173378.1 actin-binding LIM protein 3 isoform X2
- UniProtKB/TrEMBL
- A0A0R4IXJ5, A0A8M2BL22
- Related
- ENSDARP00000140642.2, ENSDART00000160598.2
- Conserved Domains (6) summary
-
- smart00153
Location:649 → 684
- VHP; Villin headpiece domain
- cd09327
Location:24 → 75
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:80 → 135
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:153 → 204
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:212 → 267
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:295 → 648
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
XM_021481043.1 → XP_021336718.1 actin-binding LIM protein 3 isoform X1
- UniProtKB/TrEMBL
-
A0A8M9QB40
- Conserved Domains (6) summary
-
- smart00153
Location:655 → 690
- VHP; Villin headpiece domain
- cd09327
Location:24 → 75
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:80 → 135
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:153 → 204
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:212 → 267
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:295 → 654
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
-
XM_005173324.4 → XP_005173381.1 actin-binding LIM protein 3 isoform X5
See identical proteins and their annotated locations for XP_005173381.1
- UniProtKB/TrEMBL
- A0A0R4IXP4, A0A8M2BKM8, B7ZVF6
- Related
- ENSDARP00000141374.2, ENSDART00000168910.3
- Conserved Domains (6) summary
-
- smart00153
Location:596 → 631
- VHP; Villin headpiece domain
- cd09327
Location:23 → 74
- LIM1_abLIM; The first LIM domain of actin binding LIM (abLIM) proteins
- cd09328
Location:79 → 134
- LIM2_abLIM; The second LIM domain on actin binding LIM (abLIM) proteins
- cd09329
Location:152 → 203
- LIM3_abLIM; The third LIM domain of actin binding LIM (abLIM) proteins
- cd09330
Location:211 → 266
- LIM4_abLIM; The fourth LIM domain of actin binding LIM (abLIM) proteins
- pfam16182
Location:301 → 595
- AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM
Reference GRCz11 ALT_DRER_TU_1
Genomic
-
NW_018394919.1 Reference GRCz11 ALT_DRER_TU_1
- Range
-
136208..267253 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCz11 ALT_DRER_TU_2
Genomic
-
NW_018395317.1 Reference GRCz11 ALT_DRER_TU_2
- Range
-
138254..269168 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)