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si:ch211-262h13.3 si:ch211-262h13.3 [ Danio rerio (zebrafish) ]

Gene ID: 569577, updated on 12-Sep-2024

Summary

Official Symbol
si:ch211-262h13.3provided by ZNC
Official Full Name
si:ch211-262h13.3provided by ZNC
Primary source
ZFIN:ZDB-GENE-050208-532
See related
Ensembl:ENSDARG00000070898 AllianceGenome:ZFIN:ZDB-GENE-050208-532
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:171271; zgc:173415
Orthologs
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Genomic context

See si:ch211-262h13.3 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (38796339..38801510, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (38809594..38814765, complement)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137488978 Neighboring gene alkaline phosphatase, intestinal, tandem duplicate 2 Neighboring gene uncharacterized LOC137488979 Neighboring gene uncharacterized LOC137488980 Neighboring gene uncharacterized LOC131080122

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC569577

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001082865.1NP_001076334.1  uncharacterized protein LOC569577

    See identical proteins and their annotated locations for NP_001076334.1

    Status: PREDICTED

    Source sequence(s)
    BX927181
    UniProtKB/TrEMBL
    A0A2R8RMR4, Q1LUV1
    Related
    ENSDARP00000115647.1, ENSDART00000140764.3
    Conserved Domains (1) summary
    pfam16064
    Location:212279
    DUF4806; Domain of unknown function (DUF4806)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    38796339..38801510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)