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stx19 syntaxin 19 [ Danio rerio (zebrafish) ]

Gene ID: 570366, updated on 12-Sep-2024

Summary

Official Symbol
stx19provided by ZNC
Official Full Name
syntaxin 19provided by ZNC
Primary source
ZFIN:ZDB-GENE-150909-2
See related
AllianceGenome:ZFIN:ZDB-GENE-150909-2
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Located in cytoplasm. Orthologous to human STX19 (syntaxin 19). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See stx19 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (16822232..16832303, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (16815280..16825189, complement)

Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137496461 Neighboring gene uncharacterized LOC137496423 Neighboring gene radial spoke head component 1 Neighboring gene CLN5 intracellular trafficking protein

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007120.7 Reference GRCz11 Primary Assembly

    Range
    16822232..16832303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021478870.2XP_021334545.1  syntaxin-19 isoform X1

    UniProtKB/TrEMBL
    A0A8M9QK10
    Conserved Domains (2) summary
    pfam00804
    Location:51248
    Syntaxin; Syntaxin
    cl22856
    Location:216282
    SNARE; SNARE motif

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394745.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    7..8982 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009304578.4XP_009302853.2  syntaxin-19 isoform X2

    UniProtKB/TrEMBL
    A0A8M3AVX8
    Conserved Domains (2) summary
    pfam00804
    Location:51248
    Syntaxin
    cl22856
    Location:216282
    SNARE; SNARE motif