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nenf neudesin neurotrophic factor [ Danio rerio (zebrafish) ]

Gene ID: 571299, updated on 2-Nov-2024

Summary

Official Symbol
nenfprovided by ZNC
Official Full Name
neudesin neurotrophic factorprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050320-129
See related
Ensembl:ENSDARG00000040192 AllianceGenome:ZFIN:ZDB-GENE-050320-129
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
sp2; wu:fa11a04; wu:fb73f07; zgc:112953; zgc:152703
Summary
Predicted to be active in endoplasmic reticulum and membrane. Orthologous to human NENF (neudesin neurotrophic factor). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See nenf in Genome Data Viewer
Location:
chromosome: 17
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (45395846..45402960)
105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (45412594..45419708)

Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene zinc finger protein 106a Neighboring gene proton activated chloride channel 1 Neighboring gene T cell activation RhoGTPase activating protein a Neighboring gene ezrin a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Clone Names

  • MGC112953, MGC152703

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
neudesin
Names
neuron derived neurotrophic factor

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001037704.2NP_001032793.2  neudesin precursor

    See identical proteins and their annotated locations for NP_001032793.2

    Status: VALIDATED

    Source sequence(s)
    AI545016, BX322589, EH553755, EH600280
    UniProtKB/TrEMBL
    Q08CU3
    Related
    ENSDARP00000058792.6, ENSDART00000058793.7
    Conserved Domains (1) summary
    pfam00173
    Location:3287
    Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007128.7 Reference GRCz11 Primary Assembly

    Range
    45395846..45402960
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)