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LOC571470 protein phosphatase 1, regulatory subunit 15B [ Danio rerio (zebrafish) ]

Gene ID: 571470, updated on 5-Oct-2024

Summary

Gene symbol
LOC571470
Gene description
protein phosphatase 1, regulatory subunit 15B
See related
Ensembl:ENSDARG00000068128
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
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Genomic context

See LOC571470 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (27077853..27085608)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (27095475..27103230)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137488287 Neighboring gene phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha Neighboring gene pleckstrin homology domain containing, family A member 7a Neighboring gene zgc:56106

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
protein phosphatase 1 regulatory subunit 15B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001045219.2NP_001038684.3  protein phosphatase 1 regulatory subunit 15B

    Status: PREDICTED

    Source sequence(s)
    BC134978
    UniProtKB/TrEMBL
    A0A8M1NA66, A4IG88
    Related
    ENSDARP00000105210.1, ENSDART00000125326.3
    Conserved Domains (1) summary
    pfam10488
    Location:200482
    PP1c_bdg; Phosphatase-1 catalytic subunit binding region

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    27077853..27085608
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395030.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    260820..268754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)