zgc:113984 zgc:113984 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: zgc:113984provided by ZNC
Official Full Name: zgc:113984provided by ZNC
Primary source: ZFIN:ZDB-GENE-050626-82
See related: Ensembl:ENSDARG00000115644 AllianceGenome:ZFIN:ZDB-GENE-050626-82
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: wu:fi49h11
Summary: Predicted to enable DNA binding activity; carbohydrate binding activity; and protein heterodimerization activity. Predicted to be located in chromosome and nucleus. Predicted to be part of nucleosome. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 25

Exon count:: 1

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	25	NC_007136.7 (35150139..35150964, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	25	NC_007136.6 (34645181..34646006, complement)

Chromosome 25 - NC_007136.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables DNA binding	IEA Inferred from Electronic Annotation more info
enables protein heterodimerization activity	IEA Inferred from Electronic Annotation more info
enables structural constituent of chromatin	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in chromosome	IEA Inferred from Electronic Annotation more info
part_of nucleosome	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uncharacterized protein LOC573997

Names: Histone H3.2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001025176.4 → NP_001020347.2 uncharacterized protein LOC573997

Status: PREDICTED

Source sequence(s)

BC153403

UniProtKB/TrEMBL

A8E503

Related

ENSDARP00000107737.2, ENSDART00000129254.2

Conserved Domains (2) summary

PTZ00018
Location:1 → 136

PTZ00018; histone H3; Provisional

pfam00125
Location:1 → 132

Histone; Core histone H2A/H2B/H3/H4