U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

inpp5l inositol polyphosphate-5-phosphatase L [ Danio rerio (zebrafish) ]

Gene ID: 641571, updated on 12-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
inpp5lprovided by ZNC
Official Full Name
inositol polyphosphate-5-phosphatase Lprovided by ZNC
Primary source
ZFIN:ZDB-GENE-051127-29
See related
Ensembl:ENSDARG00000053878 AllianceGenome:ZFIN:ZDB-GENE-051127-29
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:123248
Summary
Predicted to enable inositol-polyphosphate 5-phosphatase activity. Predicted to be involved in inositol phosphate dephosphorylation and inositol phosphate-mediated signaling. Predicted to act upstream of or within phosphatidylinositol dephosphorylation. Orthologous to human INPP5A (inositol polyphosphate-5-phosphatase A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See inpp5l in Genome Data Viewer
Location:
chromosome: 8
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (38421333..38477819, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (38390409..38444849, complement)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase NEURL3 Neighboring gene NK6 homeobox 3 Neighboring gene C2 calcium-dependent domain-containing protein 4C Neighboring gene forkhead box B2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Effects of miR-181a-5p abnormal expression on zebrafish (Danio rerio) vascular development following triclosan exposure. Ma Y, et al. Chemosphere, 2019 May. PMID 30784759
  2. Modulation of dorsal root ganglion development by ErbB signaling and the scaffold protein Sorbs3. Malmquist SJ, et al. Development, 2013 Oct. PMID 24004948, Free PMC Article
  3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Clone Names

  • MGC123248

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
  
enables inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables inositol-1,4,5-trisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables inositol-polyphosphate 5-phosphatase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables inositol-polyphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
enables phosphatase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
inositol polyphosphate-5-phosphatase A
NP_001032658.2
XP_068079121.1
XP_068079122.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001037569.2 → NP_001032658.2  inositol polyphosphate-5-phosphatase A

    Status: VALIDATED

    Source sequence(s)
    BX571947
    UniProtKB/TrEMBL
    Q2YDR0
    Related
    ENSDARP00000070468.5, ENSDART00000075989.6

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    38421333..38477819 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068223020.1 → XP_068079121.1  inositol polyphosphate-5-phosphatase A isoform X1

  2. XM_068223021.1 → XP_068079122.1  inositol polyphosphate-5-phosphatase A isoform X1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools
Miscellaneous