retsatl retinol saturase (all-trans-retinol 13,14-reductase) like [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: retsatlprovided by ZNC
Official Full Name: retinol saturase (all-trans-retinol 13,14-reductase) likeprovided by ZNC
Primary source: ZFIN:ZDB-GENE-051113-252
See related: Ensembl:ENSDARG00000034989 AllianceGenome:ZFIN:ZDB-GENE-051113-252
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: RetSat B; wu:fi35b01; zgc:123334
Summary: Predicted to enable oxidoreductase activity. Is expressed in gut and ovary. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 9

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	9	NC_007120.7 (44994253..44998722)
105	previous assembly	GRCz10 (GCF_000002035.5)	9	NC_007120.6 (45193301..45197770)

Chromosome 9 - NC_007120.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables oxidoreductase activity	IBA Inferred from Biological aspect of Ancestor more info
enables oxidoreductase activity	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: inactive all-trans-retinol 13,14-reductase

Names: inactive all-trans-13,14-dihydroretinol saturase B; retinol saturase (all-trans-retinol 13,14-reductase)-like protein; retinol saturase-like; zRetSat B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001040004.2 → NP_001035093.2 inactive all-trans-retinol 13,14-reductase precursor

Status: PROVISIONAL

Source sequence(s)

BC107980

UniProtKB/Swiss-Prot

B0S6C5

UniProtKB/TrEMBL

A0A8M1N8E2

Related

ENSDARP00000115830.1, ENSDART00000141434.2

Conserved Domains (2) summary

COG1233
Location:65 → 559

COG1233; Phytoene dehydrogenase-related protein [Secondary metabolites biosynthesis, transport and catabolism]

cl21454
Location:65 → 579

NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins