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fam169aa family with sequence similarity 169 member Aa [ Danio rerio (zebrafish) ]

Gene ID: 751650, updated on 2-Nov-2024

Summary

Official Symbol
fam169aaprovided by ZNC
Official Full Name
family with sequence similarity 169 member Aaprovided by ZNC
Primary source
ZFIN:ZDB-GENE-060825-117
See related
Ensembl:ENSDARG00000059719 AllianceGenome:ZFIN:ZDB-GENE-060825-117
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
im:7150681; wu:fi05h07; zgc:152970; si:ch211-129a6.1
Summary
Acts upstream of or within camera-type eye development. Is expressed in caudal fin. Orthologous to human FAM169A (family with sequence similarity 169 member A). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See fam169aa in Genome Data Viewer
Location:
chromosome: 5
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (51079504..51096581)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (50432911..50449988)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene glucosaminyl (N-acetyl) transferase 4a Neighboring gene uncharacterized LOC103911115 Neighboring gene zgc:194398 Neighboring gene protein-O-mannosyltransferase 1 Neighboring gene coiled-coil domain containing 180

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • MGC152970

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within camera-type eye development IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
uncharacterized protein LOC751650

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001045367.1NP_001038832.1  uncharacterized protein LOC751650

    See identical proteins and their annotated locations for NP_001038832.1

    Status: PREDICTED

    Source sequence(s)
    BC122106
    UniProtKB/TrEMBL
    Q0P4F1
    Related
    ENSDARP00000088237.4, ENSDART00000097466.4

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    51079504..51096581
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394610.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    210546..227520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)