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fam167aa family with sequence similarity 167 member Aa [ Danio rerio (zebrafish) ]

Gene ID: 768193, updated on 12-Sep-2024

Summary

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Official Symbol
fam167aaprovided by ZNC
Official Full Name
family with sequence similarity 167 member Aaprovided by ZNC
Primary source
ZFIN:ZDB-GENE-061013-209
See related
Ensembl:ENSDARG00000067665 AllianceGenome:ZFIN:ZDB-GENE-061013-209
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:153092
Summary
Orthologous to human FAM167A (family with sequence similarity 167 member A). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See fam167aa in Genome Data Viewer
Location:
chromosome: 17
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (5611166..5621090)
105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (5454070..5462702)

Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene chloride intracellular channel 5a Neighboring gene ectonucleotide pyrophosphatase/phosphodiesterase 4 Neighboring gene ras-related protein Rab-39A Neighboring gene uncharacterized LOC137488064

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC768193

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001077335.1 → NP_001070803.1  uncharacterized protein LOC768193

    See identical proteins and their annotated locations for NP_001070803.1

    Status: PREDICTED

    Source sequence(s)
    BC124636
    UniProtKB/TrEMBL
    Q08BN8
    Related
    ENSDARP00000088226.3, ENSDART00000097455.6
    Conserved Domains (1) summary
    pfam11652
    Location:99 → 182
    DUF3259; Protein of unknown function (DUF3259)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007128.7 Reference GRCz11 Primary Assembly

    Range
    5611166..5621090
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005169805.5 → XP_005169862.1  uncharacterized protein LOC768193 isoform X1

    UniProtKB/TrEMBL
    A0A8M2BH59, F1QRU5
    Related
    ENSDARP00000144122.1, ENSDART00000178720.2
    Conserved Domains (1) summary
    pfam11652
    Location:99 → 182
    DUF3259; Protein of unknown function (DUF3259)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394973.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    92609..101248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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