brms1 BRMS1 transcriptional repressor and anoikis regulator [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: brms1provided by ZNC
Official Full Name: BRMS1 transcriptional repressor and anoikis regulatorprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030616-596
See related: Ensembl:ENSDARG00000051955 AllianceGenome:ZFIN:ZDB-GENE-030616-596
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:56414; wu:fb57b08; si:zc194c5.2; si:zc188c22.3
Summary: Predicted to enable histone deacetylase binding activity. Predicted to be involved in histone deacetylation and negative regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of Sin3-type complex. Orthologous to human BRMS1 (BRMS1 transcriptional repressor and anoikis regulator). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 7

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	7	NC_007118.7 (60396957..60416095)
105	previous assembly	GRCz10 (GCF_000002035.5)	7	NC_007118.6 (60091720..60110858)

Chromosome 7 - NC_007118.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

AI497006 (e-PCR)
- UniSTS:206374

fb57b08.x1 (e-PCR)
- UniSTS:203334

fb59a08.y1 (e-PCR)
- UniSTS:190835

fa01d09.s1 (e-PCR)
- UniSTS:202122

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables histone deacetylase binding	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in negative regulation of transcription by RNA polymerase II	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
part_of Sin3-type complex	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: breast cancer metastasis-suppressor 1

Names: breast cancer metastasis suppressor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.