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zgc:113886 zgc:113886 [ Danio rerio (zebrafish) ]

Gene ID: 792031, updated on 17-Aug-2024

Summary

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Official Symbol
zgc:113886provided by ZNC
Official Full Name
zgc:113886provided by ZNC
Primary source
ZFIN:ZDB-GENE-050913-91
See related
AllianceGenome:ZFIN:ZDB-GENE-050913-91
Gene type
protein coding
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
sb:cb61; wu:fa17c11; ig:est269442
Summary
Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in diencephalon; presumptive diencephalon; and tail bud. [provided by Alliance of Genome Resources, Apr 2022]
Annotation information
not in current annotation release
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Genomic context

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See zgc:113886 in Genome Data Viewer
Location:
chromosome: 17
Annotation release Status Assembly Chr Location
105 latest, but not current GRCz10 (GCF_000002035.5) 17 NC_007128.6 (49959315..49971473, complement)

Bibliography

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Related articles in PubMed

  1. The earliest transcribed zygotic genes are short, newly evolved, and different across species. Heyn P, et al. Cell Rep, 2014 Jan 30. PMID 24440719
  2. Identification of zygotic genes expressed at the midblastula transition in zebrafish. O'Boyle S, et al. Biochem Biophys Res Commun, 2007 Jun 29. PMID 17490614
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Clone Names

  • MGC113886, MGC173565

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC792031

NCBI Reference Sequences (RefSeq)

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Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001030079.1: Suppressed sequence

    Description
    NM_001030079.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: ZNF808 (GeneID:388558).
Nucleotide Protein
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Gene LinkOut

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