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glg1a golgi glycoprotein 1a [ Danio rerio (zebrafish) ]

Gene ID: 792865, updated on 28-Oct-2024

Summary

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Official Symbol
glg1aprovided by ZNC
Official Full Name
golgi glycoprotein 1aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-6448
See related
Ensembl:ENSDARG00000061282 AllianceGenome:ZFIN:ZDB-GENE-030131-6448
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fj98a08; wu:fj98a08
Summary
Predicted to enable fibroblast growth factor binding activity. Predicted to be located in membrane and microtubule organizing center. Predicted to be active in Golgi membrane. Orthologous to human GLG1 (golgi glycoprotein 1). [provided by Alliance of Genome Resources, Oct 2024]
Orthologs
all
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Genomic context

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See glg1a in Genome Data Viewer
Location:
chromosome: 25
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (37219394..37248803, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (36649616..36678300, complement)

Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene si:dkey-234i14.2 Neighboring gene si:dkey-234i14.3 Neighboring gene ring finger and WD repeat domain 3 Neighboring gene si:dkey-234i14.6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Characterization of Oncorhynchus mykiss 5-hydroxyisourate hydrolase/transthyretin superfamily: evolutionary and functional analyses. Kasai K, et al. Gene, 2013 Dec 1. PMID 23994290
  2. Evolution of complexity in the zebrafish synapse proteome. Bayés À, et al. Nat Commun, 2017 Mar 2. PMID 28252024, Free PMC Article
  3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  5. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables fibroblast growth factor binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in Golgi membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in microtubule organizing center IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Golgi apparatus protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007136.7 Reference GRCz11 Primary Assembly

    Range
    37219394..37248803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068217595.1 → XP_068073696.1  Golgi apparatus protein 1 isoform X2

    Related
    ENSDARP00000081681.5, ENSDART00000087247.6

  2. XM_068217593.1 → XP_068073694.1  Golgi apparatus protein 1 isoform X1

  3. XM_068217594.1 → XP_068073695.1  Golgi apparatus protein 1 isoform X1

    Related
    ENSDARP00000129848.1, ENSDART00000154045.3

  4. XM_001332448.8 → XP_001332484.5  Golgi apparatus protein 1 isoform X3

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials