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LOC793521 serine protease HTRA2, mitochondrial-like [ Danio rerio (zebrafish) ]

Gene ID: 793521, updated on 17-Sep-2024

Summary

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Gene symbol
LOC793521
Gene description
serine protease HTRA2, mitochondrial-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Annotation information
Annotation category: only annotated on alternate loci in reference assembly
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Genomic context

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See LOC793521 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 10 Unlocalized Scaffold (ALT_DRER_TU_1) NW_018394793.1 (549188..561857)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (34237825..34243125)

NW_018394793.1Genomic Context describing neighboring genes Neighboring gene serine protease HTRA2, mitochondrial Neighboring gene Pim proto-oncogene, serine/threonine kinase, related 147 Neighboring gene Pim proto-oncogene, serine/threonine kinase, related 145 Neighboring gene serine protease HTRA2, mitochondrial-like Neighboring gene Pim proto-oncogene, serine/threonine kinase, related 148

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
serine protease HTRA2, mitochondrial-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394793.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    549188..561857
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021472336.2 → XP_021328011.1  serine protease HTRA2, mitochondrial-like

    UniProtKB/TrEMBL
    A0A8M9Q065, A7MC74
    Conserved Domains (1) summary
    cl28339
    Location:1 → 162
    DegQ; Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein Strain
Heading Accession and Version

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