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si:zfos-464b6.2 si:zfos-464b6.2 [ Danio rerio (zebrafish) ]

Gene ID: 794433, updated on 14-Nov-2024

Summary

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Official Symbol
si:zfos-464b6.2provided by ZNC
Official Full Name
si:zfos-464b6.2provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-5337
See related
Ensembl:ENSDARG00000054363 AllianceGenome:ZFIN:ZDB-GENE-030131-5337
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fd14a06; wu:fd14a06
Summary
Predicted to enable glycosyltransferase activity. Predicted to be involved in glycosylation. Predicted to be located in membrane. Predicted to be active in cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See si:zfos-464b6.2 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (49273987..49282875, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (49279059..49291688, complement)

Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene si:ch211-136a13.1 Neighboring gene Yip1 interacting factor homolog B (S. cerevisiae) Neighboring gene sb:cb81 Neighboring gene si:cabz01090165.1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein si:zfos-464b6.2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007129.7 Reference GRCz11 Primary Assembly

    Range
    49273987..49282875 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003200494.6 → XP_003200542.1  uncharacterized protein si:zfos-464b6.2

    UniProtKB/TrEMBL
    A0A8M1RT75, E7FE65
    Related
    ENSDARP00000071026.4, ENSDART00000076554.6
    Conserved Domains (1) summary
    pfam01697
    Location:201 → 453
    Glyco_transf_92; Glycosyltransferase family 92
Nucleotide Protein Strain
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