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LOC796453 protein FAM104A [ Danio rerio (zebrafish) ]

Gene ID: 796453, updated on 12-Sep-2024

Summary

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Gene symbol
LOC796453
Gene description
protein FAM104A
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
all
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Genomic context

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See LOC796453 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (56950018..56957566)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (56882503..56890050)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene otopetrin 2 Neighboring gene Usher syndrome 1Ga (autosomal recessive) Neighboring gene HID1 domain containing a Neighboring gene BAH and coiled-coil domain-containing protein 1 Neighboring gene fascin actin-bundling protein 2a, retinal

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC796453

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001386581.1 → NP_001373510.1  uncharacterized protein LOC796453

    Status: VALIDATED

    Source sequence(s)
    CABZ01013466, EH457655
    UniProtKB/TrEMBL
    A0A8M2BJG3
    Conserved Domains (1) summary
    pfam15434
    Location:28 → 138
    FAM104; Family 104

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    56950018..56957566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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