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smim10l3 small integral membrane protein 10 like 3 [ Danio rerio (zebrafish) ]

Gene ID: 797202, updated on 12-Sep-2024

Summary

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Gene symbol
smim10l3
Gene description
small integral membrane protein 10 like 3
See related
Ensembl:ENSDARG00000100331
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
human mouse all
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Genomic context

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See smim10l3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (56565297..56569968, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (56497861..56502532, complement)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, gamma subunit 5b Neighboring gene cytohesin 3b Neighboring gene Rac family small GTPase 1b Neighboring gene serine/threonine kinase 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
salivary gland specific protein SAGSIN1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001163443.1 → NP_001156915.1  salivary gland specific protein SAGSIN1

    Status: PROVISIONAL

    Source sequence(s)
    BC122141
    UniProtKB/TrEMBL
    A0A0G2L765, A0A8M1NRY1
    Related
    ENSDARP00000140618.1, ENSDART00000165317.2
    Conserved Domains (1) summary
    pfam15118
    Location:2 → 59
    DUF4560; Domain of unknown function (DUF4560)

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    56565297..56569968 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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