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gb:ee300746 expressed sequence EE300746 [ Danio rerio (zebrafish) ]

Gene ID: 797675, updated on 2-Nov-2024

Summary

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Official Symbol
gb:ee300746provided by ZNC
Official Full Name
expressed sequence EE300746provided by ZNC
Primary source
ZFIN:ZDB-GENE-110214-2
See related
AllianceGenome:ZFIN:ZDB-GENE-110214-2
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Orthologous to human CXorf58 (chromosome X open reading frame 58). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See gb:ee300746 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (4421395..4432409)
105 previous assembly GRCz10 (GCF_000002035.5) Unplaced Scaffold NW_003051371.3 (50186..60950, complement)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene spermidine/spermine N1-acetyltransferase 1a, duplicate 2 Neighboring gene apolipoprotein O, a Neighboring gene zinc finger Y-chromosomal protein 1 Neighboring gene zgc:153704

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein CXorf58 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    4421395..4432409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021476378.2 → XP_021332053.1  uncharacterized protein CXorf58 homolog

    UniProtKB/TrEMBL
    A0A8M9PY92
Nucleotide Protein Strain
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