svbp small vasohibin binding protein [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: svbpprovided by ZNC
Official Full Name: small vasohibin binding proteinprovided by ZNC
Primary source: ZFIN:ZDB-GENE-140106-191
See related: Ensembl:ENSDARG00000102305 AllianceGenome:ZFIN:ZDB-GENE-140106-191
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: ccdc23
Summary: Predicted to enable microtubule binding activity. Predicted to be involved in axon development; proteolysis; and regulation of metallopeptidase activity. Predicted to be located in cytoplasm; cytoskeleton; and extracellular region. Orthologous to human SVBP (small vasohibin binding protein). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 11

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
106	current	GRCz11 (GCF_000002035.6)	11	NC_007122.7 (41064822..41067789)
105	previous assembly	GRCz10 (GCF_000002035.5)	11	NC_007122.6 (41731465..41734432)

Chromosome 11 - NC_007122.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables microtubule binding	ISS Inferred from Sequence or Structural Similarity more info

Process	Evidence Code	Pubs
involved_in axon development	ISS Inferred from Sequence or Structural Similarity more info
involved_in proteolysis	ISS Inferred from Sequence or Structural Similarity more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info
located_in extracellular region	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: small vasohibin-binding protein

Names: coiled-coil domain containing 23; coiled-coil domain-containing protein 23; zmp:0000001231

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.