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LOC799006 serine protease HTRA2, mitochondrial [ Danio rerio (zebrafish) ]

Gene ID: 799006, updated on 17-Sep-2024

Summary

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Gene symbol
LOC799006
Gene description
serine protease HTRA2, mitochondrial
See related
Ensembl:ENSDARG00000076713
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

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See LOC799006 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (9478601..9492705)
105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (9123886..9160684)

Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene glutaredoxin and cysteine rich domain containing 1 b Neighboring gene serine protease HTRA2, mitochondrial Neighboring gene si:dkey-265c15.9 Neighboring gene HtrA serine peptidase 2-10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
serine protease HTRA2, mitochondrial
Names
novel serine protease protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007124.7 Reference GRCz11 Primary Assembly

    Range
    9478601..9492705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068213137.1 → XP_068069238.1  serine protease HTRA2, mitochondrial isoform X1

    Related
    ENSDARP00000128099.2, ENSDART00000156317.3

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394866.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    89144..101536
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021472671.2 → XP_021328346.1  serine protease HTRA2, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A8M9Q163
    Conserved Domains (1) summary
    cd00987
    Location:15 → 75
    PDZ_serine_protease; PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind ...
Nucleotide Protein
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