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PUS5 pseudouridine synthase PUS5 [ Saccharomyces cerevisiae S288C ]

Gene ID: 850862, updated on 2-Nov-2024

Summary

Official Symbol
PUS5
Official Full Name
pseudouridine synthase PUS5
Primary source
SGD:S000004155
Locus tag
YLR165C
See related
AllianceGenome:SGD:S000004155; FungiDB:YLR165C; VEuPathDB:YLR165C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Enables pseudouridylate synthase activity. Involved in pseudouridine synthesis and rRNA modification. Located in mitochondrion. Orthologous to human RPUSD3 (RNA pseudouridine synthase D3) and RPUSD4 (RNA pseudouridine synthase D4). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See PUS5 in Genome Data Viewer
Location:
chromosome: XII
Exon count:
1
Sequence:
Chromosome: XII; NC_001144.5 (494494..495258, complement)

Chromosome XII - NC_001144.5Genomic Context describing neighboring genes Neighboring gene mitochondrial processing peptidase Neighboring gene protein SHH4 Neighboring gene exocyst subunit SEC10 Neighboring gene ubiquitin-ribosomal 40S subunit protein S31 fusion protein

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables 21S rRNA pseudouridine(2819) synthase activity IEA
Inferred from Electronic Annotation
more info
 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
 
enables pseudouridine synthase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables pseudouridine synthase activity IEA
Inferred from Electronic Annotation
more info
 
enables pseudouridylate synthase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
involved_in enzyme-directed rRNA pseudouridine synthesis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in pseudouridine synthesis IEA
Inferred from Electronic Annotation
more info
 
involved_in pseudouridine synthesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in rRNA modification IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in rRNA processing IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion IMP
Inferred from Mutant Phenotype
more info
PubMed 

General protein information

Preferred Names
pseudouridine synthase PUS5
NP_013266.1
  • Pseudouridine synthase; catalyzes only the formation of pseudouridine (Psi)-2819 in mitochondrial 21S rRNA; not essential for viability

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001144.5 Reference assembly

    Range
    494494..495258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182052.1NP_013266.1  TPA: pseudouridine synthase PUS5 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013266.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VYH1, Q06244
    UniProtKB/TrEMBL
    G2WJ00
    Conserved Domains (1) summary
    COG0564
    Location:4205
    RluA; Pseudouridylate synthase, 23S rRNA- or tRNA-specific [Translation, ribosomal structure and biogenesis]