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uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 852253, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
SGD:S000000124
Locus tag
YBL028C
See related
AllianceGenome:SGD:S000000124; FungiDB:YBL028C; VEuPathDB:YBL028C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in nucleolus. Part of preribosome, large subunit precursor. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_001134.8 (167518..167838, complement)

Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene ribosomal 60S subunit protein L19B Neighboring gene Sm-like protein LSM2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001134.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Organization and characterization of the two yeast ribosomal protein YL19 genes. Song JM, et al. Curr Genet, 1996 Sep. PMID 8781168
  2. Nucleolar size regulates nuclear envelope shape in Saccharomyces cerevisiae. Male G, et al. J Cell Sci, 2020 Oct 30. PMID 32973112
  3. The budding yeast rRNA and ribosome biosynthesis (RRB) regulon contains over 200 genes. Wade CH, et al. Yeast, 2006 Mar. PMID 16544271
  4. In vivo functional characterization of the Saccharomyces cerevisiae 60S biogenesis GTPase Nog1. Fuentes JL, et al. Mol Genet Genomics, 2007 Jul. PMID 17443350
  5. Mutational Analysis of the Nsa2 N-Terminus Reveals Its Essential Role in Ribosomal 60S Subunit Assembly. Paternoga H, et al. Int J Mol Sci, 2020 Nov 30. PMID 33266193, Free PMC Article

See all (28) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in nucleolus HDA PubMed 
located_in nucleus HDA PubMed 
part_of preribosome, large subunit precursor HDA PubMed 

General protein information

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Preferred Names
uncharacterized protein
NP_009525.1
  • hypothetical protein that may interact with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; predicted to be involved in ribosome biogenesis

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001134.8 Reference assembly

    Range
    167518..167838 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178268.1 → NP_009525.1  TPA: uncharacterized protein YBL028C [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009525.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VPX2, P38202
    UniProtKB/TrEMBL
    A6ZKS0, B3LNG5, C7GX83, C8Z3W8, G2W8Y1, N1P7E6
    Conserved Domains (1) summary
    pfam10338
    Location:1 → 44
    DUF2423; Protein of unknown function (DUF2423)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P38202.1

Gene LinkOut

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