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STB6 Stb6p [ Saccharomyces cerevisiae S288C ]

Gene ID: 853790, updated on 2-Nov-2024

Summary

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Official Symbol
STB6
Official Full Name
Stb6p
Primary source
SGD:S000001555
Locus tag
YKL072W
See related
AllianceGenome:SGD:S000001555; FungiDB:YKL072W; VEuPathDB:YKL072W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to be part of Sin3-type complex. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See STB6 in Genome Data Viewer
Location:
chromosome: XI
Exon count:
1
Sequence:
Chromosome: XI; NC_001143.9 (299582..301882)

Chromosome XI - NC_001143.9Genomic Context describing neighboring genes Neighboring gene Mud2p Neighboring gene Hsp70 family chaperone LHS1 Neighboring gene tRNA-Trp Neighboring gene Osi1p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001143.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of the Saccharomyces cerevisiae genes STB1-STB5 encoding Sin3p binding proteins. Kasten MM, et al. Mol Gen Genet, 1997 Oct. PMID 9393435
  2. Vps68 cooperates with ESCRT-III in intraluminal vesicle formation. Alsleben S, et al. J Cell Sci, 2022 May 15. PMID 35445263
  3. Genetic basis for Saccharomyces cerevisiae biofilm in liquid medium. Scherz K, et al. G3 (Bethesda), 2014 Jul 9. PMID 25009170, Free PMC Article
  4. Complete DNA sequence of yeast chromosome XI. Dujon B, et al. Nature, 1994 Jun 2. PMID 8196765
  5. Epistatic relationships reveal the functional organization of yeast transcription factors. Zheng J, et al. Mol Syst Biol, 2010 Oct 5. PMID 20959818, Free PMC Article

See all (21) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
part_of Sin3-type complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Stb6p
NP_012851.1
  • Protein that binds Sin3p in a two-hybrid assay; STB6 has a paralog, STB2, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001143.9 Reference assembly

    Range
    299582..301882
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179638.1 → NP_012851.1  TPA: Stb6p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_012851.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VXL4, P36085
    UniProtKB/TrEMBL
    A6ZZP3, B3LR18, C7GVN5, N1P0J8
    Conserved Domains (1) summary
    pfam08598
    Location:601 → 687
    Sds3; Sds3-like
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P36085.1

Gene LinkOut

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