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    TXNL1P1 thioredoxin like 1 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100419095, updated on 17-Sep-2024

    Summary

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    Official Symbol
    TXNL1P1provided by HGNC
    Official Full Name
    thioredoxin like 1 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:39459
    See related
    Ensembl:ENSG00000231879 AllianceGenome:HGNC:39459
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See TXNL1P1 in Genome Data Viewer
    Location:
    13q31.1
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (86725538..86726056)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (85927884..85928402)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (87377793..87378311)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903227 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr13:87010205-87011035 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87015457-87015956 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87015957-87016956 Neighboring gene NANOG hESC enhancer GRCh37_chr13:87017515-87018053 Neighboring gene uncharacterized LOC105370299 Neighboring gene uncharacterized LOC105370300 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:87492703-87493204 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:87493205-87493704 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87533403-87534006 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87534007-87534608 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:87534609-87535210 Neighboring gene H3K27ac hESC enhancer GRCh37_chr13:87535211-87535812 Neighboring gene long intergenic non-protein coding RNA 430

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_024942.1 

      Range
      101..619
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      86725538..86726056
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      85927884..85928402
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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