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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_051089.1 RefSeqGene
- Range
-
5201..27160
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_175748.4 → NP_786924.2 putative E3 ubiquitin-protein ligase UBR7
See identical proteins and their annotated locations for NP_786924.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) represents the longer transcript and encodes the supported protein.
- Source sequence(s)
-
BC051819, DB047433
- Consensus CDS
-
CCDS9909.1
- UniProtKB/Swiss-Prot
- Q86U21, Q86UA9, Q8N806, Q96BY0, Q9NVV6
- Related
- ENSP00000013070.6, ENST00000013070.11
- Conserved Domains (2) summary
-
- cd15542
Location:134 → 185
- PHD_UBR7; PHD finger found in putative E3 ubiquitin-protein ligase UBR7
- pfam02207
Location:46 → 113
- zf-UBR; Putative zinc finger in N-recognin (UBR box)
RNA
-
NR_038150.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an internal exon in the 5' region, compared to variant 2. This variant is represented as non-coding because the use of the expected translational start codon, as used in variant 2, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
BC051819, DA158479, DB047433
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
93207256..93229215
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Reference GRCh38.p14 ALT_REF_LOCI_1
Genomic
-
NT_187601.1 Reference GRCh38.p14 ALT_REF_LOCI_1
- Range
-
321818..343777
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
87439146..87461127
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001100417.1: Suppressed sequence
- Description
- NM_001100417.1: This RefSeq was permanently suppressed because the transcript is a nonsense-mediated mRNA decay (NMD) candidate.