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    spryd4 SPRY domain containing 4 [ Danio rerio (zebrafish) ]

    Gene ID: 100005939, updated on 28-Oct-2024

    Summary

    Official Symbol
    spryd4provided by ZNC
    Official Full Name
    SPRY domain containing 4provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040718-180
    See related
    Ensembl:ENSDARG00000023309 AllianceGenome:ZFIN:ZDB-GENE-040718-180
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:92875
    Summary
    Orthologous to human SPRYD4 (SPRY domain containing 4). [provided by Alliance of Genome Resources, Oct 2024]
    Orthologs
    NEW
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    Genomic context

    See spryd4 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (21159163..21162762)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (21127078..21130677)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene carnitine palmitoyltransferase 2 Neighboring gene porcupine O-acyltransferase Neighboring gene glutaminase 2a (liver, mitochondrial) Neighboring gene collagen, type II, alpha 1a Neighboring gene cryptochrome circadian regulator 3a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General protein information

    Preferred Names
    SPRY domain-containing protein 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001002477.1NP_001002477.1  SPRY domain-containing protein 4

      See identical proteins and their annotated locations for NP_001002477.1

      Status: PROVISIONAL

      Source sequence(s)
      BC076335
      UniProtKB/TrEMBL
      A0A8M1N0G1, Q6DGK7
      Related
      ENSDARP00000037635.6, ENSDART00000033491.7
      Conserved Domains (1) summary
      cd12903
      Location:47215
      SPRY_PRY_SPRYD4; PRY/SPRY domain containing protein 4 (SPRYD4)

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      21159163..21162762
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394720.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      196480..200093
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)