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    DUSP5 dual specificity phosphatase 5 [ Homo sapiens (human) ]

    Gene ID: 1847, updated on 2-Nov-2024

    Summary

    Official Symbol
    DUSP5provided by HGNC
    Official Full Name
    dual specificity phosphatase 5provided by HGNC
    Primary source
    HGNC:HGNC:3071
    See related
    Ensembl:ENSG00000138166 MIM:603069; AllianceGenome:HGNC:3071
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    DUSP; HVH3
    Summary
    The protein encoded by this gene is a member of the dual specificity protein phosphatase subfamily. These phosphatases inactivate their target kinases by dephosphorylating both the phosphoserine/threonine and phosphotyrosine residues. They negatively regulate members of the mitogen-activated protein (MAP) kinase superfamily (MAPK/ERK, SAPK/JNK, p38), which are associated with cellular proliferation and differentiation. Different members of the family of dual specificity phosphatases show distinct substrate specificities for various MAP kinases, different tissue distribution and subcellular localization, and different modes of inducibility of their expression by extracellular stimuli. This gene product inactivates ERK1, is expressed in a variety of tissues with the highest levels in pancreas and brain, and is localized in the nucleus. [provided by RefSeq, Jul 2008]
    Expression
    Broad expression in esophagus (RPKM 53.4), gall bladder (RPKM 35.1) and 22 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See DUSP5 in Genome Data Viewer
    Location:
    10q25.2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (110497907..110511533)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (111381715..111395339)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (112257665..112271291)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4023 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4024 Neighboring gene high mobility group box 3 pseudogene 5 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:112219715-112220914 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4027 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4028 Neighboring gene DUSP5 divergent transcript Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:112256187-112256710 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2815 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2816 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2817 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2818 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4029 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4030 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4031 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4032 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4033 Neighboring gene Sharpr-MPRA regulatory region 14569 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4034 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2819 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4035 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4036 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:112313217-112313794 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr10:112313795-112314372 Neighboring gene ribosomal protein L7 pseudogene 35 Neighboring gene uncharacterized LOC105378483 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:112325756-112326458

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Phenotypes

    EBI GWAS Catalog

    Description
    Genome-wide association study of Crohn's disease in Koreans revealed three new susceptibility loci and common attributes of genetic susceptibility across ethnic populations.
    EBI GWAS Catalog

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables MAP kinase tyrosine phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables MAP kinase tyrosine/serine/threonine phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables myosin phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables phosphatase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables protein tyrosine phosphatase activity TAS
    Traceable Author Statement
    more info
    PubMed 
    enables protein tyrosine/serine/threonine phosphatase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein tyrosine/serine/threonine phosphatase activity TAS
    Traceable Author Statement
    more info
     
    enables protein tyrosine/threonine phosphatase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Process Evidence Code Pubs
    involved_in ERK1 and ERK2 cascade TAS
    Traceable Author Statement
    more info
     
    involved_in MAPK cascade TAS
    Traceable Author Statement
    more info
     
    involved_in dephosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in endoderm formation IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in negative regulation of MAPK cascade IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in peptidyl-threonine dephosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in peptidyl-tyrosine dephosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in protein dephosphorylation TAS
    Traceable Author Statement
    more info
    PubMed 
    involved_in signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleoplasm TAS
    Traceable Author Statement
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    dual specificity protein phosphatase 5
    Names
    VH1-like phosphatase 3
    dual specificity protein phosphatase hVH3
    serine/threonine specific protein phosphatase
    NP_004410.3

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_004419.4NP_004410.3  dual specificity protein phosphatase 5

      See identical proteins and their annotated locations for NP_004410.3

      Status: REVIEWED

      Source sequence(s)
      AL355512, BC062545, BF979291, BI495660, CB991409, U15932
      Consensus CDS
      CCDS7566.1
      UniProtKB/Swiss-Prot
      Q12997, Q16690, Q5T603
      UniProtKB/TrEMBL
      Q59EI8
      Related
      ENSP00000358596.3, ENST00000369583.4
      Conserved Domains (3) summary
      COG2453
      Location:227311
      CDC14; Protein-tyrosine phosphatase [Signal transduction mechanisms]
      cd00127
      Location:178314
      DSPc; Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or ...
      cd01446
      Location:5140
      DSP_MapKP; N-terminal regulatory rhodanese domain of dual specificity phosphatases (DSP), such as Mapk Phosphatase. This domain is believed to determine substrate specificity by binding the substrate, such as ERK2, and activating the C-terminal catalytic domain by ...

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      110497907..110511533
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      111381715..111395339
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)