pdap1a pdgfa associated protein 1a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: pdap1aprovided by ZNC
Official Full Name: pdgfa associated protein 1aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-1693
See related: Ensembl:ENSDARG00000092546 AllianceGenome:ZFIN:ZDB-GENE-030131-1693
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: fb78b01; zgc:56344; wu:fb78b01; wu:fk28b01
Summary: Predicted to be active in cytosol. Orthologous to human PDAP1 (PDGFA associated protein 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 12

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	12	NC_007123.7 (19199735..19204444)
105	previous assembly	GRCz10 (GCF_000002035.5)	12	NC_007123.6 (19077861..19082570)

Chromosome 12 - NC_007123.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

fk28b01.y1 (e-PCR)
- UniSTS:200744

fb78b01.x1 (e-PCR)
- UniSTS:203436

Gene Ontology Provided by ZFIN

Component	Evidence Code	Pubs
is_active_in cytosol	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: pdgfa associated protein 1a

Names: slc16a8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.