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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_032162.2Â RefSeqGene
- Range
-
40058..218331
- Download
- GenBank, FASTA, Sequence Viewer (Graphics), LRG_882
mRNA and Protein(s)
-
NM_001289396.2 → NP_001276325.1  probable global transcription activator SNF2L2 isoform a
See identical proteins and their annotated locations for NP_001276325.1
Status: REVIEWED
- Source sequence(s)
-
AL138755, AL359076
- Consensus CDS
-
CCDS34977.1
- UniProtKB/Swiss-Prot
- B1ALG3, B1ALG4, D3DRH4, D3DRH5, P51531
- UniProtKB/TrEMBL
-
A0A0U1RQZ9
- Related
- ENSP00000371638.1, ENST00000382203.5
- Conserved Domains (10) summary
-
- cd05516
Location:1382 → 1506
- Bromo_SNF2L2; Bromodomain, SNF2L2-like subfamily, specific to animals. SNF2L2 (SNF2-alpha) or SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 is a global transcriptional activator, which cooperates with nuclear hormone ...
- smart00592
Location:590 → 632
- BRK; domain in transcription and CHROMO domain helicases
- smart00573
Location:436 → 508
- HSA; domain in helicases and associated with SANT domains
- cd00046
Location:744 → 883
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam08430
Location:40 → 174
- Forkhead_N; Forkhead N-terminal region
- pfam00176
Location:727 → 1022
- SNF2_N; SNF2 family N-terminal domain
- pfam00271
Location:1049 → 1164
- Helicase_C; Helicase conserved C-terminal domain
- pfam08880
Location:173 → 207
- QLQ; QLQ
- pfam14619
Location:1259 → 1326
- SnAC; Snf2-ATP coupling, chromatin remodelling complex
- cl02556
Location:1333 → 1419
- Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
-
NM_001289397.2 → NP_001276326.1  probable global transcription activator SNF2L2 isoform c
Status: REVIEWED
- Source sequence(s)
-
BC068252, CA313181, D26155
- Consensus CDS
-
CCDS83338.1
- UniProtKB/TrEMBL
- A0A0U1RQZ9, F6VDE0
- Related
- ENSP00000392081.2, ENST00000450198.6
- Conserved Domains (10) summary
-
- cd05516
Location:1324 → 1430
- Bromo_SNF2L2; Bromodomain, SNF2L2-like subfamily, specific to animals. SNF2L2 (SNF2-alpha) or SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 is a global transcriptional activator, which cooperates with nuclear hormone ...
- smart00592
Location:590 → 632
- BRK; domain in transcription and CHROMO domain helicases
- smart00573
Location:436 → 508
- HSA; domain in helicases and associated with SANT domains
- cd00046
Location:744 → 872
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam08430
Location:40 → 174
- Forkhead_N; Forkhead N-terminal region
- pfam00176
Location:727 → 964
- SNF2_N; SNF2 family N-terminal domain
- pfam00271
Location:991 → 1106
- Helicase_C; Helicase conserved C-terminal domain
- pfam08880
Location:173 → 207
- QLQ; QLQ
- pfam14619
Location:1201 → 1268
- SnAC; Snf2-ATP coupling, chromatin remodelling complex
- cl02556
Location:1275 → 1337
- Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
-
NM_001289398.2 → NP_001276327.1  probable global transcription activator SNF2L2 isoform d
Status: REVIEWED
- Source sequence(s)
-
AL138755, BI758293, CA313181, CD107405, CD513892, DA084762, DA823500
- Consensus CDS
-
CCDS75807.1
- UniProtKB/TrEMBL
-
F6T8Q0
- Related
- ENSP00000324770.6, ENST00000324954.10
- Conserved Domains (2) summary
-
- cd05516
Location:58 → 164
- Bromo_SNF2L2; Bromodomain, SNF2L2-like subfamily, specific to animals. SNF2L2 (SNF2-alpha) or SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 is a global transcriptional activator, which cooperates with nuclear hormone ...
- cl02556
Location:9 → 71
- Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
-
NM_001289399.2 → NP_001276328.1  probable global transcription activator SNF2L2 isoform e precursor
See identical proteins and their annotated locations for NP_001276328.1
Status: REVIEWED
- Source sequence(s)
-
AL138755
- Consensus CDS
-
CCDS83339.1
- UniProtKB/TrEMBL
- B4DNT1, F6XG14
- Related
- ENSP00000371620.2, ENST00000382185.6
- Conserved Domains (2) summary
-
- cd05516
Location:86 → 192
- Bromo_SNF2L2; Bromodomain, SNF2L2-like subfamily, specific to animals. SNF2L2 (SNF2-alpha) or SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 is a global transcriptional activator, which cooperates with nuclear hormone ...
- cl02556
Location:37 → 99
- Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
-
NM_001289400.2 → NP_001276329.1  probable global transcription activator SNF2L2 isoform f precursor
Status: REVIEWED
- Source sequence(s)
-
AL138755
- Consensus CDS
-
CCDS75808.1
- UniProtKB/TrEMBL
-
B1ALF6
- Related
- ENSP00000305411.3, ENST00000302401.8
- Conserved Domains (2) summary
-
- cd05516
Location:88 → 194
- Bromo_SNF2L2; Bromodomain, SNF2L2-like subfamily, specific to animals. SNF2L2 (SNF2-alpha) or SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 is a global transcriptional activator, which cooperates with nuclear hormone ...
- cl02556
Location:39 → 101
- Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
-
NM_003070.5 → NP_003061.3  probable global transcription activator SNF2L2 isoform a
See identical proteins and their annotated locations for NP_003061.3
Status: REVIEWED
- Source sequence(s)
-
AK094076, AL558829, BC040029, BC066596, BC068252, X72889
- Consensus CDS
-
CCDS34977.1
- UniProtKB/Swiss-Prot
- B1ALG3, B1ALG4, D3DRH4, D3DRH5, P51531
- UniProtKB/TrEMBL
-
A0A0U1RQZ9
- Related
- ENSP00000265773.5, ENST00000349721.8
- Conserved Domains (10) summary
-
- cd05516
Location:1382 → 1506
- Bromo_SNF2L2; Bromodomain, SNF2L2-like subfamily, specific to animals. SNF2L2 (SNF2-alpha) or SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 is a global transcriptional activator, which cooperates with nuclear hormone ...
- smart00592
Location:590 → 632
- BRK; domain in transcription and CHROMO domain helicases
- smart00573
Location:436 → 508
- HSA; domain in helicases and associated with SANT domains
- cd00046
Location:744 → 883
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam08430
Location:40 → 174
- Forkhead_N; Forkhead N-terminal region
- pfam00176
Location:727 → 1022
- SNF2_N; SNF2 family N-terminal domain
- pfam00271
Location:1049 → 1164
- Helicase_C; Helicase conserved C-terminal domain
- pfam08880
Location:173 → 207
- QLQ; QLQ
- pfam14619
Location:1259 → 1326
- SnAC; Snf2-ATP coupling, chromatin remodelling complex
- cl02556
Location:1333 → 1419
- Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
-
NM_139045.4 → NP_620614.2  probable global transcription activator SNF2L2 isoform b
See identical proteins and their annotated locations for NP_620614.2
Status: REVIEWED
- Source sequence(s)
-
AK094076, BC040029, BC066596, BC068252, X72889
- Consensus CDS
-
CCDS34978.1
- UniProtKB/TrEMBL
-
A0A0U1RQZ9
- Related
- ENSP00000349788.2, ENST00000357248.8
- Conserved Domains (10) summary
-
- cd05516
Location:1382 → 1488
- Bromo_SNF2L2; Bromodomain, SNF2L2-like subfamily, specific to animals. SNF2L2 (SNF2-alpha) or SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2 is a global transcriptional activator, which cooperates with nuclear hormone ...
- smart00592
Location:590 → 632
- BRK; domain in transcription and CHROMO domain helicases
- smart00573
Location:436 → 508
- HSA; domain in helicases and associated with SANT domains
- cd00046
Location:744 → 883
- DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
- pfam08430
Location:40 → 174
- Forkhead_N; Forkhead N-terminal region
- pfam00176
Location:727 → 1022
- SNF2_N; SNF2 family N-terminal domain
- pfam00271
Location:1049 → 1164
- Helicase_C; Helicase conserved C-terminal domain
- pfam08880
Location:173 → 207
- QLQ; QLQ
- pfam14619
Location:1259 → 1326
- SnAC; Snf2-ATP coupling, chromatin remodelling complex
- cl02556
Location:1333 → 1395
- Bromodomain; Bromodomain. Bromodomains are found in many chromatin-associated proteins and in nuclear histone acetyltransferases. They interact specifically with acetylated lysine.
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000009.12Â Reference GRCh38.p14 Primary Assembly
- Range
-
2015347..2193620
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060933.1Â Alternate T2T-CHM13v2.0
- Range
-
2017871..2196083
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)