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    erh ERH mRNA splicing and mitosis factor [ Danio rerio (zebrafish) ]

    Gene ID: 30475, updated on 2-Nov-2024

    Summary

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    Official Symbol
    erhprovided by ZNC
    Official Full Name
    ERH mRNA splicing and mitosis factorprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-990415-57
    See related
    Ensembl:ENSDARG00000032866 AllianceGenome:ZFIN:ZDB-GENE-990415-57
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    zgc:86761
    Summary
    Predicted to be located in nucleus. Orthologous to human ERH (ERH mRNA splicing and mitosis factor). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See erh in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 20 NC_007131.7 (33490114..33497144, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 20 NC_007131.6 (33591050..33594265, complement)

    Chromosome 20 - NC_007131.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137488668 Neighboring gene SMEK homolog 1, suppressor of mek1 (Dictyostelium) Neighboring gene uncharacterized LOC137488669 Neighboring gene papilin b, proteoglycan-like sulfated glycoprotein Neighboring gene dynein regulatory complex subunit 1 homolog (Chlamydomonas)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Toxicity of emerging antifouling biocides to non-target freshwater organisms from three trophic levels. Oliveira IB, et al. Aquat Toxicol, 2017 Oct. PMID 28843204
    2. The putative cell cycle gene, enhancer of rudimentary, encodes a highly conserved protein found in plants and animals. Gelsthorpe M, et al. Gene, 1997 Feb 28. PMID 9074495
    3. Analysis of DNA methylation reveals a partial reprogramming of the Müller glia genome during retina regeneration. Powell C, et al. Proc Natl Acad Sci U S A, 2013 Dec 3. PMID 24248357, Free PMC Article
    4. Evolution of complexity in the zebrafish synapse proteome. Bayés À, et al. Nat Commun, 2017 Mar 2. PMID 28252024, Free PMC Article
    5. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    enhancer of rudimentary homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001271817.1 → NP_001258746.1  enhancer of rudimentary homolog

      See identical proteins and their annotated locations for NP_001258746.1

      Status: VALIDATED

      Source sequence(s)
      CT674675, EH478279, EH543119
      UniProtKB/Swiss-Prot
      Q6IQH5, Q98874
      Related
      ENSDARP00000092749.3, ENSDART00000101974.4
      Conserved Domains (1) summary
      pfam01133
      Location:2 → 99
      ER; Enhancer of rudimentary

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007131.7 Reference GRCz11 Primary Assembly

      Range
      33490114..33497144 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068215375.1 → XP_068071476.1  enhancer of rudimentary homolog isoform X1

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_131228.1: Suppressed sequence

      Description
      NM_131228.1: This RefSeq was permanently suppressed because it is now thought that this transcript is partial.
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q98874.1 GenPept UniProtKB/Swiss-Prot:Q98874

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