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    si:ch211-126c2.4 si:ch211-126c2.4 [ Danio rerio (zebrafish) ]

    Gene ID: 563788, updated on 17-Aug-2024

    Summary

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    Official Symbol
    si:ch211-126c2.4provided by ZNC
    Official Full Name
    si:ch211-126c2.4provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-3087
    See related
    Ensembl:ENSDARG00000105479 AllianceGenome:ZFIN:ZDB-GENE-030131-3087
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fc26g07; wu:fc26g07
    Orthologs
    all
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    Genomic context

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    Location:
    chromosome: 14
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (30898881..30905488, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (30558568..30578382, complement)

    Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene ubiquitin-like 3b Neighboring gene solute carrier family 7 member 3b Neighboring gene forkhead box O4 Neighboring gene sestrin 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    General protein information

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    Preferred Names
    uncharacterized protein si:ch211-126c2.4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007125.7 Reference GRCz11 Primary Assembly

      Range
      30898881..30905488 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021481192.1 → XP_021336867.1  uncharacterized protein si:ch211-126c2.4 isoform X2

      UniProtKB/TrEMBL
      A0A2R8RM09, A0A8M9PZR5
      Conserved Domains (1) summary
      cl26464
      Location:706 → 864
      Atrophin-1; Atrophin-1 family

    2. XM_021481191.1 → XP_021336866.1  uncharacterized protein si:ch211-126c2.4 isoform X1

      UniProtKB/TrEMBL
      A0A140LFS1, A0A8M9QL01
      Conserved Domains (1) summary
      cl26464
      Location:680 → 850
      Atrophin-1; Atrophin-1 family
    Nucleotide Protein
    Heading Accession and Version

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