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    gadd45ga growth arrest and DNA-damage-inducible, gamma a [ Danio rerio (zebrafish) ]

    Gene ID: 402991, updated on 2-Nov-2024

    Summary

    Official Symbol
    gadd45gaprovided by ZNC
    Official Full Name
    growth arrest and DNA-damage-inducible, gamma aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1882
    See related
    Ensembl:ENSDARG00000019417 AllianceGenome:ZFIN:ZDB-GENE-040426-1882
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    gadd45g; zgc:77806
    Summary
    Predicted to be involved in regulation of cell cycle. Predicted to be active in cytoplasm and nucleus. Is expressed in several structures, including anterior axial hypoblast; endocrine system; mesoderm; nervous system; and pectoral fin. Orthologous to human GADD45G (growth arrest and DNA damage inducible gamma). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See gadd45ga in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (31367667..31369144, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (31358435..31359912, complement)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100331417 Neighboring gene un-named hu7912 Neighboring gene cAMP responsive element binding protein 3-like 3 like Neighboring gene NIM1 serine/threonine protein kinase a

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Clone Names

    • MGC77806

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in regulation of cell cycle IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within regulation of cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    growth arrest and DNA-damage-inducible, gamma a
    Names
    gadd45gamma
    growth arrest and DNA damage 45 gamma

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205691.1NP_991254.1  growth arrest and DNA-damage-inducible, gamma a

      See identical proteins and their annotated locations for NP_991254.1

      Status: PROVISIONAL

      Source sequence(s)
      BC065870
      UniProtKB/TrEMBL
      A0A2R8QMX3, F6P317, Q6P021
      Related
      ENSDARP00000023235.4, ENSDART00000019937.6
      Conserved Domains (1) summary
      pfam01248
      Location:24126
      Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family

    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      31367667..31369144 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394733.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      124420..125897 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)