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    glg1a golgi glycoprotein 1a [ Danio rerio (zebrafish) ]

    Gene ID: 792865, updated on 28-Oct-2024

    Summary

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    Official Symbol
    glg1aprovided by ZNC
    Official Full Name
    golgi glycoprotein 1aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-6448
    See related
    Ensembl:ENSDARG00000061282 AllianceGenome:ZFIN:ZDB-GENE-030131-6448
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    fj98a08; wu:fj98a08
    Summary
    Predicted to enable fibroblast growth factor binding activity. Predicted to be located in membrane and microtubule organizing center. Predicted to be active in Golgi membrane. Orthologous to human GLG1 (golgi glycoprotein 1). [provided by Alliance of Genome Resources, Oct 2024]
    Orthologs
    all
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    Genomic context

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    See glg1a in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (37219394..37248803, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (36649616..36678300, complement)

    Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene si:dkey-234i14.2 Neighboring gene si:dkey-234i14.3 Neighboring gene ring finger and WD repeat domain 3 Neighboring gene si:dkey-234i14.6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Characterization of Oncorhynchus mykiss 5-hydroxyisourate hydrolase/transthyretin superfamily: evolutionary and functional analyses. Kasai K, et al. Gene, 2013 Dec 1. PMID 23994290
    2. Evolution of complexity in the zebrafish synapse proteome. Bayés À, et al. Nat Commun, 2017 Mar 2. PMID 28252024, Free PMC Article
    3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    5. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables fibroblast growth factor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in Golgi membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in microtubule organizing center IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Golgi apparatus protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007136.7 Reference GRCz11 Primary Assembly

      Range
      37219394..37248803 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_068217595.1 → XP_068073696.1  Golgi apparatus protein 1 isoform X2

      Related
      ENSDARP00000081681.5, ENSDART00000087247.6

    2. XM_068217593.1 → XP_068073694.1  Golgi apparatus protein 1 isoform X1

    3. XM_068217594.1 → XP_068073695.1  Golgi apparatus protein 1 isoform X1

      Related
      ENSDARP00000129848.1, ENSDART00000154045.3

    4. XM_001332448.8 → XP_001332484.5  Golgi apparatus protein 1 isoform X3

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials