thyn1 thymocyte nuclear protein 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: thyn1provided by ZNC
Official Full Name: thymocyte nuclear protein 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-040426-1585
See related: Ensembl:ENSDARG00000042659 AllianceGenome:ZFIN:ZDB-GENE-040426-1585
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:66269
Summary: Predicted to be active in nucleus. Orthologous to human THYN1 (thymocyte nuclear protein 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 15

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	15	NC_007126.7 (19331159..19334238, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	15	NC_007126.6 (19395427..19398506, complement)

Chromosome 15 - NC_007126.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in nucleus	IBA Inferred from Biological aspect of Ancestor more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: thymocyte nuclear protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_200657.2 → NP_956951.2 thymocyte nuclear protein 1

Status: VALIDATED

Source sequence(s)

BX324206

UniProtKB/Swiss-Prot

Q6PFL8

UniProtKB/TrEMBL

A0A8M1PEU1, F1QDP5

Related

ENSDARP00000062575.4, ENSDART00000062576.5

Conserved Domains (1) summary

pfam01878
Location:62 → 224

EVE; EVE domain