wdr44 WD repeat domain 44 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: wdr44provided by ZNC
Official Full Name: WD repeat domain 44provided by ZNC
Primary source: ZFIN:ZDB-GENE-030131-9549
See related: Ensembl:ENSDARG00000060249 AllianceGenome:ZFIN:ZDB-GENE-030131-9549
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: sb:eu546; wu:fj86d11; si:ch211-1c14.1
Summary: Is expressed in neuromast; peripheral olfactory organ; and pronephric duct. Orthologous to human WDR44 (WD repeat domain 44). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 19

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	5	NC_007116.7 (37316683..37341044, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	5	NC_007116.6 (36716530..36740891, complement)

Chromosome 5 - NC_007116.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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General protein information

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Preferred Names: WD repeat-containing protein 44

Names: WD repeat domain 44 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001100038.2 → NP_001093508.1 WD repeat-containing protein 44

Status: PROVISIONAL

Source sequence(s)

BX927261, CT025762

UniProtKB/TrEMBL

A0A8M1NE21, A5PN22

Related

ENSDARP00000079110.4, ENSDART00000084675.7

Conserved Domains (3) summary

COG2319
Location:489 → 902

WD40; WD40 repeat [General function prediction only]

sd00039
Location:506 → 546

7WD40; WD40 repeat [structural motif]

cl02567
Location:502 → 843

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...