mtnr1aa melatonin receptor 1A a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: mtnr1aaprovided by ZNC
Official Full Name: melatonin receptor 1A aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-990415-155
See related: Ensembl:ENSDARG00000037545 AllianceGenome:ZFIN:ZDB-GENE-990415-155
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: mt1; mel1ar; mtnr1ar; zgc:110628
Summary: Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to act upstream of or within rhythmic process and signal transduction. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in female organism and male organism. Orthologous to human MTNR1A (melatonin receptor 1A). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

Location:: chromosome: 1

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	1	NC_007112.7 (18251338..18336878, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	1	NC_007112.6 (17558401..17643941, complement)

Chromosome 1 - NC_007112.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

G40045 (e-PCR)
- UniSTS:66769

MEL1aR (e-PCR)
- UniSTS:205300

G45949 (e-PCR)
- UniSTS:106751

Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables G protein-coupled receptor activity	IBA Inferred from Biological aspect of Ancestor more info
enables G protein-coupled receptor activity	IEA Inferred from Electronic Annotation more info
enables melatonin receptor activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in G protein-coupled receptor signaling pathway	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within G protein-coupled receptor signaling pathway	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within rhythmic process	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within signal transduction	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in plasma membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: melatonin receptor type 1A-A

Names: mel-1A-R; mel-1A-R-A; mel1a receptor A; melatonin receptor Mel1a Z1.7-4; melatonin receptor type 1A z1.7; zMel1a1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_131393.1 → NP_571468.1 melatonin receptor type 1A-A

See identical proteins and their annotated locations for NP_571468.1

Status: PROVISIONAL

Source sequence(s)

BC092957

UniProtKB/Swiss-Prot

P51046, Q567Z2, Q804J0

UniProtKB/TrEMBL

B2GP09

Related

ENSDARP00000054673.4, ENSDART00000054674.5

Conserved Domains (2) summary

pfam00001
Location:44 → 295

7tm_1; 7 transmembrane receptor (rhodopsin family)

cl21561
Location:35 → 204

7tm_4; Olfactory receptor